diff --git a/cli/tests/unit/utime_test.ts b/cli/tests/unit/utime_test.ts
index 48f4f405ab..5101cb376f 100644
--- a/cli/tests/unit/utime_test.ts
+++ b/cli/tests/unit/utime_test.ts
@@ -27,6 +27,27 @@ Deno.test(
   },
 );
 
+Deno.test(
+  { permissions: { read: true, write: true } },
+  async function fsFileUtimeSyncSuccess() {
+    const testDir = await Deno.makeTempDir();
+    const filename = testDir + "/file.txt";
+    using file = await Deno.open(filename, {
+      create: true,
+      write: true,
+    });
+
+    const atime = 1000;
+    const mtime = 50000;
+    await file.utime(atime, mtime);
+    await file.dataSync();
+
+    const fileInfo = Deno.statSync(filename);
+    assertEquals(fileInfo.atime, new Date(atime * 1000));
+    assertEquals(fileInfo.mtime, new Date(mtime * 1000));
+  },
+);
+
 Deno.test(
   { permissions: { read: true, write: true } },
   function futimeSyncSuccess() {
@@ -48,6 +69,27 @@ Deno.test(
   },
 );
 
+Deno.test(
+  { permissions: { read: true, write: true } },
+  function futimeSyncSuccess() {
+    const testDir = Deno.makeTempDirSync();
+    const filename = testDir + "/file.txt";
+    using file = Deno.openSync(filename, {
+      create: true,
+      write: true,
+    });
+
+    const atime = 1000;
+    const mtime = 50000;
+    file.utimeSync(atime, mtime);
+    file.dataSyncSync();
+
+    const fileInfo = Deno.statSync(filename);
+    assertEquals(fileInfo.atime, new Date(atime * 1000));
+    assertEquals(fileInfo.mtime, new Date(mtime * 1000));
+  },
+);
+
 Deno.test(
   { permissions: { read: true, write: true } },
   function utimeSyncFileSuccess() {
diff --git a/cli/tsc/dts/lib.deno.ns.d.ts b/cli/tsc/dts/lib.deno.ns.d.ts
index ff37abb84d..175276b66c 100644
--- a/cli/tsc/dts/lib.deno.ns.d.ts
+++ b/cli/tsc/dts/lib.deno.ns.d.ts
@@ -2632,6 +2632,32 @@ declare namespace Deno {
      * @category I/O
      */
     dataSyncSync(): void;
+    /**
+     * Changes the access (`atime`) and modification (`mtime`) times of the
+     * file stream resource. Given times are either in seconds (UNIX epoch
+     * time) or as `Date` objects.
+     *
+     * ```ts
+     * using file = await Deno.open("file.txt", { create: true, write: true });
+     * await file.utime(1556495550, new Date());
+     * ```
+     *
+     * @category File System
+     */
+    utime(atime: number | Date, mtime: number | Date): Promise<void>;
+    /**
+     * Synchronously changes the access (`atime`) and modification (`mtime`)
+     * times of the file stream resource. Given times are either in seconds
+     * (UNIX epoch time) or as `Date` objects.
+     *
+     * ```ts
+     * using file = Deno.openSync("file.txt", { create: true, write: true });
+     * file.utime(1556495550, new Date());
+     * ```
+     *
+     * @category File System
+     */
+    utimeSync(atime: number | Date, mtime: number | Date): void;
     /** Close the file. Closing a file when you are finished with it is
      * important to avoid leaking resources.
      *
@@ -5379,6 +5405,9 @@ declare namespace Deno {
    * Deno.futimeSync(file.rid, 1556495550, new Date());
    * ```
    *
+   * @deprecated Use {@linkcode Deno.FsFile.utimeSync} instead.
+   * {@linkcode Deno.futimeSync} will be removed in Deno 2.0.
+   *
    * @category File System
    */
   export function futimeSync(
@@ -5397,6 +5426,9 @@ declare namespace Deno {
    * await Deno.futime(file.rid, 1556495550, new Date());
    * ```
    *
+   * @deprecated Use {@linkcode Deno.FsFile.utime} instead.
+   * {@linkcode Deno.futime} will be removed in Deno 2.0.
+   *
    * @category File System
    */
   export function futime(
diff --git a/ext/fs/30_fs.js b/ext/fs/30_fs.js
index 8100899505..2136d88f65 100644
--- a/ext/fs/30_fs.js
+++ b/ext/fs/30_fs.js
@@ -752,6 +752,14 @@ class FsFile {
     op_fs_fsync_sync(this.#rid);
   }
 
+  async utime(atime, mtime) {
+    await futime(this.#rid, atime, mtime);
+  }
+
+  utimeSync(atime, mtime) {
+    futimeSync(this.#rid, atime, mtime);
+  }
+
   [SymbolDispose]() {
     core.tryClose(this.#rid);
   }
diff --git a/ext/node/polyfills/_fs/_fs_futimes.ts b/ext/node/polyfills/_fs/_fs_futimes.ts
index 8a29db26b3..9bd41e114f 100644
--- a/ext/node/polyfills/_fs/_fs_futimes.ts
+++ b/ext/node/polyfills/_fs/_fs_futimes.ts
@@ -4,6 +4,7 @@
 // deno-lint-ignore-file prefer-primordials
 
 import type { CallbackWithError } from "ext:deno_node/_fs/_fs_common.ts";
+import { FsFile } from "ext:deno_fs/30_fs.js";
 
 function getValidTime(
   time: number | string | Date,
@@ -38,7 +39,8 @@ export function futimes(
   atime = getValidTime(atime, "atime");
   mtime = getValidTime(mtime, "mtime");
 
-  Deno.futime(fd, atime, mtime).then(() => callback(null), callback);
+  // TODO(@littledivy): Treat `fd` as real file descriptor.
+  new FsFile(fd).utime(atime, mtime).then(() => callback(null), callback);
 }
 
 export function futimesSync(
@@ -49,5 +51,6 @@ export function futimesSync(
   atime = getValidTime(atime, "atime");
   mtime = getValidTime(mtime, "mtime");
 
-  Deno.futimeSync(fd, atime, mtime);
+  // TODO(@littledivy): Treat `fd` as real file descriptor.
+  new FsFile(fd).utimeSync(atime, mtime);
 }
diff --git a/runtime/js/90_deno_ns.js b/runtime/js/90_deno_ns.js
index 72ba0c8d15..638e7afe70 100644
--- a/runtime/js/90_deno_ns.js
+++ b/runtime/js/90_deno_ns.js
@@ -108,8 +108,22 @@ const denoNs = {
     );
     return fs.ftruncate(rid, len);
   },
-  futime: fs.futime,
-  futimeSync: fs.futimeSync,
+  async futime(rid, atime, mtime) {
+    internals.warnOnDeprecatedApi(
+      "Deno.futime()",
+      new Error().stack,
+      "Use `Deno.FsFile.utime()` instead.",
+    );
+    await fs.futime(rid, atime, mtime);
+  },
+  futimeSync(rid, atime, mtime) {
+    internals.warnOnDeprecatedApi(
+      "Deno.futimeSync()",
+      new Error().stack,
+      "Use `Deno.FsFile.utimeSync()` instead.",
+    );
+    fs.futimeSync(rid, atime, mtime);
+  },
   errors: errors.errors,
   inspect: console.inspect,
   env: os.env,